U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SMPD2 sphingomyelin phosphodiesterase 2 [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112297006, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SMPD2
Gene description
sphingomyelin phosphodiesterase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SMPD2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 11 NC_071397.1 (62134919..62138254)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020090638.1 (19081247..19084474)

Chromosome 11 - NC_071397.1Genomic Context describing neighboring genes Neighboring gene CD164 molecule Neighboring gene chromosome 11 C1orf35 homolog Neighboring gene peptidylprolyl isomerase like 6 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 1 Neighboring gene uncharacterized LOC128779539 Neighboring gene zinc finger and BTB domain containing 24

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sphingomyelin phosphodiesterase 2
Names
Putative sphingomyelinase family protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071397.1 Reference HLdesRot8A Primary Assembly

    Range
    62134919..62138254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024551797.3 → XP_024407565.2  sphingomyelin phosphodiesterase 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.