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PNPLA6 patatin like phospholipase domain containing 6 [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112296375, updated on 30-Mar-2024

Summary

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Gene symbol
PNPLA6
Gene description
patatin like phospholipase domain containing 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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See PNPLA6 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 10 NC_071396.1 (39205630..39225887, complement)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020093960.1 (560015..580517, complement)

Chromosome 10 - NC_071396.1Genomic Context describing neighboring genes Neighboring gene XPA binding protein 2 Neighboring gene calmodulin regulated spectrin associated protein family member 3 Neighboring gene mucolipin TRP cation channel 1 Neighboring gene zinc finger protein 358

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071396.1 Reference HLdesRot8A Primary Assembly

    Range
    39205630..39225887 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024551227.3 → XP_024406995.2  patatin-like phospholipase domain-containing protein 6 isoform X6

  2. XM_045188255.2 → XP_045044190.2  patatin-like phospholipase domain-containing protein 6 isoform X7

  3. XM_024551226.3 → XP_024406994.2  patatin-like phospholipase domain-containing protein 6 isoform X5

  4. XM_045188252.2 → XP_045044187.2  patatin-like phospholipase domain-containing protein 6 isoform X2

  5. XM_024551222.3 → XP_024406990.2  patatin-like phospholipase domain-containing protein 6 isoform X4

  6. XM_045188253.2 → XP_045044188.2  patatin-like phospholipase domain-containing protein 6 isoform X3

  7. XM_045188251.2 → XP_045044186.2  patatin-like phospholipase domain-containing protein 6 isoform X1

  8. XM_045188256.2 → XP_045044191.2  patatin-like phospholipase domain-containing protein 6 isoform X8

  9. XM_045188258.2 → XP_045044193.2  patatin-like phospholipase domain-containing protein 6 isoform X10

  10. XM_045188257.2 → XP_045044192.2  patatin-like phospholipase domain-containing protein 6 isoform X9

Nucleotide Protein
Heading Accession and Version

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