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PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112296373, updated on 10-Oct-2024

Summary

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Gene symbol
PAPSS1
Gene description
3'-phosphoadenosine 5'-phosphosulfate synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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See PAPSS1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) 4 NC_071390.1 (100224356..100311717, complement)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020090527.1 (35152228..35239273)

Chromosome 4 - NC_071390.1Genomic Context describing neighboring genes Neighboring gene dickkopf WNT signaling pathway inhibitor 2 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene sphingomyelin synthase 2 Neighboring gene cytochrome P450 2U1 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables adenylylsulfate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfate adenylyltransferase (ATP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfate assimilation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1
Names
Putative bifunctional atp sulfurylase/adenosine 5'-phosphosulfate kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071390.1 Reference HLdesRot8A Primary Assembly

    Range
    100224356..100311717 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045187233.2 → XP_045043168.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X3

  2. XM_045187247.2 → XP_045043182.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X5

  3. XM_024551220.3 → XP_024406988.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X2

    UniProtKB/TrEMBL
    K9ITE8
    Conserved Domains (2) summary
    cd00517
    Location:254 → 617
    ATPS; ATP-sulfurylase
    pfam01583
    Location:51 → 205
    APS_kinase; Adenylylsulphate kinase

  4. XM_045187243.2 → XP_045043178.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X4

    Conserved Domains (2) summary
    cd00517
    Location:233 → 596
    ATPS; ATP-sulfurylase
    pfam01583
    Location:30 → 184
    APS_kinase; Adenylylsulphate kinase

  5. XM_024551231.3 → XP_024406999.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X4

    UniProtKB/TrEMBL
    K9ITE8
    Conserved Domains (2) summary
    cd00517
    Location:233 → 596
    ATPS; ATP-sulfurylase
    pfam01583
    Location:30 → 184
    APS_kinase; Adenylylsulphate kinase

  6. XM_045187222.2 → XP_045043157.2  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X1

Nucleotide Protein
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