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LOC112286939 hydroxyproline O-galactosyltransferase GALT6-like [ Physcomitrium patens ]

Gene ID: 112286939, updated on 20-Sep-2024

Summary

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Gene symbol
LOC112286939
Gene description
hydroxyproline O-galactosyltransferase GALT6-like
Locus tag
PHYPA_001840
Gene type
protein coding
RefSeq status
MODEL
Organism
Physcomitrium patens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
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Genomic context

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See LOC112286939 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Phypa V3 (GCF_000002425.4) 1 NC_037253.1 (27808774..27815211)

Chromosome 1 - NC_037253.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112280216 Neighboring gene protein SCAR1-like Neighboring gene ADP-ribosylation factor 4-like Neighboring gene geranylgeranyl transferase type-2 subunit beta 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037253.1 Chromosome 1 Reference Phypa V3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase GALT6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Phypa V3 Primary Assembly

Genomic

  1. NC_037253.1 Reference Phypa V3 Primary Assembly

    Range
    27808774..27815211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024529393.1 → XP_024385161.1  hydroxyproline O-galactosyltransferase GALT6-like

    UniProtKB/TrEMBL
    A0A2K1LBK7
    Conserved Domains (1) summary
    PLN03133
    Location:150 → 686
    PLN03133; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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