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LOC112274674 tRNA (guanine(26)-N(2))-dimethyltransferase-like [ Physcomitrium patens ]

Gene ID: 112274674, updated on 20-Sep-2024

Summary

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Gene symbol
LOC112274674
Gene description
tRNA (guanine(26)-N(2))-dimethyltransferase-like
Locus tag
PHYPA_026789
Gene type
protein coding
RefSeq status
MODEL
Organism
Physcomitrium patens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
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Genomic context

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See LOC112274674 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Phypa V3 (GCF_000002425.4) 22 NC_037274.1 (3878320..3882676)

Chromosome 22 - NC_037274.1Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase setd3-like Neighboring gene uncharacterized LOC112275294 Neighboring gene pyruvate kinase 1, cytosolic-like Neighboring gene uncharacterized LOC112275270

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037274.1 Chromosome 22 Reference Phypa V3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N2-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (guanine(26)-N(2))-dimethyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Phypa V3 Primary Assembly

Genomic

  1. NC_037274.1 Reference Phypa V3 Primary Assembly

    Range
    3878320..3882676
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024504341.1 → XP_024360109.1  tRNA (guanine(26)-N(2))-dimethyltransferase-like

    UniProtKB/TrEMBL
    A0A2K1IMH6
    Conserved Domains (1) summary
    cl17173
    Location:87 → 487
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_024504340.1 → XP_024360108.1  tRNA (guanine(26)-N(2))-dimethyltransferase-like

    UniProtKB/TrEMBL
    A0A2K1IMH6
    Conserved Domains (1) summary
    cl17173
    Location:87 → 487
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_024504338.1 → XP_024360106.1  tRNA (guanine(26)-N(2))-dimethyltransferase-like

    UniProtKB/TrEMBL
    A0A2K1IMH6
    Conserved Domains (1) summary
    cl17173
    Location:87 → 487
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  4. XM_024504339.1 → XP_024360107.1  tRNA (guanine(26)-N(2))-dimethyltransferase-like

    UniProtKB/TrEMBL
    A0A2K1IMH6
    Conserved Domains (1) summary
    cl17173
    Location:87 → 487
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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