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LOC112274251 mitochondrial carnitine/acylcarnitine carrier-like protein [ Physcomitrium patens ]

Gene ID: 112274251, updated on 20-Sep-2024

Summary

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Gene symbol
LOC112274251
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Locus tag
PHYPA_025971
Gene type
protein coding
RefSeq status
MODEL
Organism
Physcomitrium patens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
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Genomic context

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See LOC112274251 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Phypa V3 (GCF_000002425.4) 21 NC_037273.1 (6462117..6464341)

Chromosome 21 - NC_037273.1Genomic Context describing neighboring genes Neighboring gene dihydrodipicolinate reductase-like protein CRR1, chloroplastic Neighboring gene uncharacterized LOC112274246 Neighboring gene fructose-bisphosphate aldolase 1, chloroplastic-like Neighboring gene ammonium transporter 1 member 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037273.1 Chromosome 21 Reference Phypa V3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Phypa V3 Primary Assembly

Genomic

  1. NC_037273.1 Reference Phypa V3 Primary Assembly

    Range
    6462117..6464341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024503572.1 → XP_024359340.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A2K1IRF6
    Conserved Domains (1) summary
    pfam00153
    Location:233 → 316
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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