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LOC112268468 uncharacterized LOC112268468 [ Homo sapiens (human) ]

Gene ID: 112268468, updated on 17-Sep-2024

Summary

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Gene symbol
LOC112268468
Gene description
uncharacterized LOC112268468
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC112268468 in Genome Data Viewer
Location:
4q22.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (92026136..92028391)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (95352611..95354866)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene coiled-coil serine rich protein 1 Neighboring gene NANOG hESC enhancer GRCh37_chr4:92189716-92190272 Neighboring gene uncharacterized LOC124900733 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21725 Neighboring gene NANOG hESC enhancer GRCh37_chr4:92371022-92371547 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:92544662-92545502 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:92547183-92548021 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:92550289-92550831 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:92580856-92581378 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:92581379-92581901 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:92614849-92615391 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:92899097-92899690 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:92899691-92900284 Neighboring gene keratin 19 pseudogene 6 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:93050287-93050788 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:93050789-93051288 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:93104511-93105710 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:93192087-93192994 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:93193903-93194810 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:93194811-93195716 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:93197533-93198440 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:93198441-93199346 Neighboring gene lncRNA p53 regulated and ESC associated 2 Neighboring gene PMPCA pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    92026136..92028391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002959799.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    95352611..95354866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007074827.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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