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LOC112268411 uncharacterized LOC112268411 [ Homo sapiens (human) ]

Gene ID: 112268411, updated on 22-Oct-2024

Summary

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Gene symbol
LOC112268411
Gene description
uncharacterized LOC112268411
See related
Ensembl:ENSG00000236106
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC112268411 in Genome Data Viewer
Location:
2p25.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (5726469..5730354)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (5747902..5752091)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1248 Neighboring gene uncharacterized LOC124908052 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11118 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11119 Neighboring gene SRY-box transcription factor 11 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:5865940-5866895 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:5881029-5881529 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:5937560-5938759 Neighboring gene long intergenic non-protein coding RNA 1810 Neighboring gene sciatic injury induced lincRNA upregulator of SOX11 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:6114361-6114862 Neighboring gene microRNA 7158

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    5726469..5730354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002959368.2 RNA Sequence

    Related
    ENST00000655406.2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    5747902..5752091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071527.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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