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LOC112268090 uncharacterized LOC112268090 [ Homo sapiens (human) ]

Gene ID: 112268090, updated on 17-Jun-2024

Summary

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Gene symbol
LOC112268090
Gene description
uncharacterized LOC112268090
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC112268090 in Genome Data Viewer
Location:
12p13.31
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (8244023..8295442)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ALG1 like 10, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:8390159-8390659 Neighboring gene family with sequence similarity 86, member A pseudogene Neighboring gene long intergenic non-protein coding RNA 2449 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4209 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4210 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4211 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4212 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4213 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:8396767-8397266 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:8404422-8404982 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 5 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:8432901-8433710 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:8437184-8438383 Neighboring gene uncharacterized LOC107987171 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5932 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:8472091-8472950 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:8472951-8473810 Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000012.12 Chromosome 12 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    8244023..8295442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007063199.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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