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alg2 ALG2 alpha-1,3/1,6-mannosyltransferase [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112240345, updated on 18-Sep-2024

Summary

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Gene symbol
alg2
Gene description
ALG2 alpha-1,3/1,6-mannosyltransferase
See related
Ensembl:ENSOTSG00005063436
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See alg2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Otsh_v2.0 (GCF_018296145.1) Unplaced Scaffold NW_024609786.1 (149634..154895)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Unplaced Scaffold NW_020130538.1 (91413..96706, complement)

NW_024609786.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 4 group A member 3-like Neighboring gene SEC61 translocon subunit beta Neighboring gene DOMON domain-containing protein FRRS1L Neighboring gene uncharacterized LOC121845885 Neighboring gene transmembrane protein 245

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NW_024609786.1 Reference Otsh_v2.0 Primary Assembly

    Range
    149634..154895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042318089.1 → XP_042174023.1  alpha-1,3/1,6-mannosyltransferase ALG2

    UniProtKB/TrEMBL
    A0A8C8IXE1
    Conserved Domains (1) summary
    cd03805
    Location:2 → 398
    GT4_ALG2-like; alpha-1,3/1,6-mannosyltransferase ALG2 and similar proteins

  2. XM_024408647.2 → XP_024264415.2  alpha-1,3/1,6-mannosyltransferase ALG2

    UniProtKB/TrEMBL
    A0A8C8IXE1
    Related
    ENSOTSP00005106718.1, ENSOTST00005136914.1
    Conserved Domains (1) summary
    cd03805
    Location:2 → 398
    GT4_ALG2-like; alpha-1,3/1,6-mannosyltransferase ALG2 and similar proteins
Nucleotide Protein
Heading Accession and Version

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