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ccdc33 coiled-coil domain containing 33 [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112214178, updated on 15-Mar-2024

Summary

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Gene symbol
ccdc33
Gene description
coiled-coil domain containing 33
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See ccdc33 in Genome Data Viewer
Location:
chromosome: LG01
Exon count:
12
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG01 NC_056429.1 (1610004..1671146)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 1 NC_037097.1 (800077..802104, complement)

Linkage Group LG01 - NC_056429.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin superfamily containing leucine-rich repeat 2 Neighboring gene signaling receptor and transporter of retinol STRA6 Neighboring gene E3 ubiquitin-protein ligase arih1-like Neighboring gene uncharacterized LOC121847834 Neighboring gene stomatin (EPB72)-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein ccdc33

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056429.1 Reference Otsh_v2.0 Primary Assembly

    Range
    1610004..1671146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042327600.1 → XP_042183534.1  uncharacterized protein ccdc33

    Conserved Domains (3) summary
    cl17507
    Location:31 → 120
    LbR-like; Left-handed beta-roll, including virulence factors and various other proteins
    TIGR02168
    Location:338 → 638
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam05109
    Location:92 → 331
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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