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LOC112190507 UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [ Rosa chinensis ]

Gene ID: 112190507, updated on 7-Dec-2023

Summary

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Gene symbol
LOC112190507
Gene description
UDP-glucuronate:xylan alpha-glucuronosyltransferase 1
Locus tag
RchiOBHm_Chr2g0120261
Gene type
protein coding
RefSeq status
MODEL
Organism
Rosa chinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Genomic context

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See LOC112190507 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
101 current RchiOBHm-V2 (GCF_002994745.2) 2 NC_037089.1 (33004630..33008257)

Chromosome 2 - NC_037089.1Genomic Context describing neighboring genes Neighboring gene cyclic nucleotide-gated ion channel 1 Neighboring gene uncharacterized LOC121051138 Neighboring gene uncharacterized LOC121051312 Neighboring gene probable pectinesterase/pectinesterase inhibitor 51 Neighboring gene zinc finger CCCH domain-containing protein 38

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037089.1 Chromosome 2 Reference RchiOBHm-V2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronate:xylan alpha-glucuronosyltransferase 1
Names
putative glucuronosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rosa chinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RchiOBHm-V2

Genomic

  1. NC_037089.1 Reference RchiOBHm-V2

    Range
    33004630..33008257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024329941.2 → XP_024185709.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 1

    UniProtKB/TrEMBL
    A0A2P6RS81
    Conserved Domains (1) summary
    cd02537
    Location:306 → 551
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_024329943.2 → XP_024185711.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 1

    UniProtKB/TrEMBL
    A0A2P6RS81
    Conserved Domains (1) summary
    cd02537
    Location:306 → 551
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
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