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LOC112182328 uncharacterized LOC112182328 [ Rosa chinensis ]

Gene ID: 112182328, updated on 7-Dec-2023

Summary

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Gene symbol
LOC112182328
Gene description
uncharacterized LOC112182328
Locus tag
RchiOBHm_Chr1g0364131
Gene type
protein coding
RefSeq status
MODEL
Organism
Rosa chinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Genomic context

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See LOC112182328 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
101 current RchiOBHm-V2 (GCF_002994745.2) 1 NC_037088.1 (55375739..55377039, complement)

Chromosome 1 - NC_037088.1Genomic Context describing neighboring genes Neighboring gene protein GET4 Neighboring gene uncharacterized LOC112182478 Neighboring gene salt stress-induced hydrophobic peptide ESI3 Neighboring gene uncharacterized LOC112181430

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037088.1 Chromosome 1 Reference RchiOBHm-V2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC112182328
Names
putative beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rosa chinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RchiOBHm-V2

Genomic

  1. NC_037088.1 Reference RchiOBHm-V2

    Range
    55375739..55377039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024320804.2 → XP_024176572.1  uncharacterized protein LOC112182328

    UniProtKB/TrEMBL
    A0A2P6SJP0
    Conserved Domains (1) summary
    pfam04724
    Location:40 → 387
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
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