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LOC112166358 uncharacterized LOC112166358 [ Rosa chinensis ]

Gene ID: 112166358, updated on 7-Dec-2023

Summary

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Gene symbol
LOC112166358
Gene description
uncharacterized LOC112166358
Locus tag
RchiOBHm_Chr5g0033981
Gene type
protein coding
RefSeq status
MODEL
Organism
Rosa chinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Genomic context

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See LOC112166358 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
101 current RchiOBHm-V2 (GCF_002994745.2) 5 NC_037092.1 (27878412..27880488)

Chromosome 5 - NC_037092.1Genomic Context describing neighboring genes Neighboring gene thioredoxin Neighboring gene F-box/FBD/LRR-repeat protein At1g13570-like Neighboring gene 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial Neighboring gene terminal nucleotidyltransferase 4B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037092.1 Chromosome 5 Reference RchiOBHm-V2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC112166358
Names
putative dynein ATPase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rosa chinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RchiOBHm-V2

Genomic

  1. NC_037092.1 Reference RchiOBHm-V2

    Range
    27878412..27880488
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024303183.2 → XP_024158951.1  uncharacterized protein LOC112166358

    UniProtKB/TrEMBL
    A0A2P6QAU5
    Conserved Domains (1) summary
    cl03131
    Location:66 → 167
    Dynein_light; Dynein light chain type 1

RNA

  1. XR_005800668.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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