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crkl v-crk avian sarcoma virus CT10 oncogene homolog-like [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112163343, updated on 10-Jul-2024

Summary

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Gene symbol
crkl
Gene description
v-crk avian sarcoma virus CT10 oncogene homolog-like
See related
EnsemblRapid:ENSOMEG00005010577
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See crkl in Genome Data Viewer
Location:
chromosome: LG12
Exon count:
3
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG12 NC_050523.1 (16560998..16571845)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096103.1 (16561007..16571845)

Linkage Group LG12 - NC_050523.1Genomic Context describing neighboring genes Neighboring gene unc-51 like autophagy activating kinase 1 Neighboring gene coiled-coil domain-containing protein 74A Neighboring gene T-box protein VegT Neighboring gene matrix metalloproteinase-17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
crk-like protein
Names
CRK like proto-oncogene, adaptor protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050523.1 Reference ASM292280v2 Primary Assembly

    Range
    16560998..16571845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024299692.2 → XP_024155460.1  crk-like protein

    UniProtKB/TrEMBL
    A0A3B3DYJ4
    Related
    ENSOMEP00005023657.1, ENSOMET00005026100.1
    Conserved Domains (4) summary
    cd09926
    Location:6 → 106
    SH2_CRK_like; Src homology 2 domain found in cancer-related signaling adaptor protein CRK
    cd11758
    Location:124 → 178
    SH3_CRK_N; N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    cd11759
    Location:240 → 296
    SH3_CRK_C; C-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    pfam09606
    Location:161 → 280
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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