U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

poglut1 protein O-glucosyltransferase 1 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112160080, updated on 10-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
poglut1
Gene description
protein O-glucosyltransferase 1
See related
EnsemblRapid:ENSOMEG00005004264
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See poglut1 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
12
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG2 NC_050513.1 (9472639..9478176)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096097.1 (9213146..9218629)

Linkage Group LG2 - NC_050513.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112160123 Neighboring gene VANGL planar cell polarity protein 1 Neighboring gene calsequestrin-2 Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene multidrug resistance-associated protein 4 Neighboring gene multidrug resistance-associated protein 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050513.1 Reference ASM292280v2 Primary Assembly

    Range
    9472639..9478176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024294439.2 → XP_024150207.1  protein O-glucosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B3BAP4, A0A834C185
    Related
    ENSOMEP00005008045.1, ENSOMET00005009210.1
    Conserved Domains (1) summary
    cl23835
    Location:44 → 378
    Glyco_transf_90; Glycosyl transferase family 90

  2. XM_024294440.2 → XP_024150208.1  protein O-glucosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cl23835
    Location:1 → 307
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.