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LOC112156683 elongation factor 2 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112156683, updated on 10-Jul-2024

Summary

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Gene symbol
LOC112156683
Gene description
elongation factor 2
See related
EnsemblRapid:ENSOMEG00005014813
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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Genomic context

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See LOC112156683 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
13
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG2 NC_050513.1 (12174808..12183437, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096093.1 (6821214..6829844, complement)

Linkage Group LG2 - NC_050513.1Genomic Context describing neighboring genes Neighboring gene unc-13 homolog A (C. elegans) Neighboring gene high mobility group 20B Neighboring gene trans-aconitate 3-methyltransferase Neighboring gene receptor activity-modifying protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050513.1 Reference ASM292280v2 Primary Assembly

    Range
    12174808..12183437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024288960.2 → XP_024144728.1  elongation factor 2

    UniProtKB/TrEMBL
    A0A3B3DHP7, A0A834C6D1
    Related
    ENSOMEP00005033830.1, ENSOMET00005037383.1
    Conserved Domains (1) summary
    PTZ00416
    Location:1 → 858
    PTZ00416; elongation factor 2; Provisional
Nucleotide Protein Strain
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Gene LinkOut

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