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eif2a eukaryotic translation initiation factor 2A [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112149279, updated on 10-Jul-2024

Summary

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Gene symbol
eif2a
Gene description
eukaryotic translation initiation factor 2A
See related
EnsemblRapid:ENSOMEG00005014075
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See eif2a in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
16
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG13 NC_050524.1 (250510..259486, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096085.1 (28492614..28501277)

Linkage Group LG13 - NC_050524.1Genomic Context describing neighboring genes Neighboring gene MINDY family member 4B Neighboring gene TSEN34 tRNA splicing endonuclease subunit Neighboring gene stress-associated endoplasmic reticulum protein 1 Neighboring gene matrix metallopeptidase 23bb

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050524.1 Reference ASM292280v2 Primary Assembly

    Range
    250510..259486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024276897.2 → XP_024132665.1  eukaryotic translation initiation factor 2A

    UniProtKB/TrEMBL
    A0A3B3CD85, A0A834F9Y2
    Related
    ENSOMEP00005032230.1, ENSOMET00005035457.1
    Conserved Domains (3) summary
    COG2319
    Location:30 → 374
    WD40; WD40 repeat [General function prediction only]
    pfam08662
    Location:215 → 410
    eIF2A; Eukaryotic translation initiation factor eIF2A
    sd00039
    Location:276 → 314
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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