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gpx8 glutathione peroxidase 8 (putative) [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112148490, updated on 10-Jul-2024

Summary

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Gene symbol
gpx8
Gene description
glutathione peroxidase 8 (putative)
See related
EnsemblRapid:ENSOMEG00005005253
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See gpx8 in Genome Data Viewer
Location:
chromosome: LG9
Exon count:
3
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG9 NC_050520.1 (6204819..6207483, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096084.1 (22212872..22215410)

Linkage Group LG9 - NC_050520.1Genomic Context describing neighboring genes Neighboring gene multicilin Neighboring gene uncharacterized LOC112147940 Neighboring gene cell division cycle protein 20 homolog B Neighboring gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable glutathione peroxidase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050520.1 Reference ASM292280v2 Primary Assembly

    Range
    6204819..6207483 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024275656.2 → XP_024131424.1  probable glutathione peroxidase 8

    UniProtKB/TrEMBL
    A0A3B3DNM3
    Related
    ENSOMEP00005010346.1, ENSOMET00005011684.1
    Conserved Domains (1) summary
    cl00388
    Location:47 → 199
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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