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LOC112136886 elongation factor 1-alpha [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112136886, updated on 10-Jul-2024

Summary

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Gene symbol
LOC112136886
Gene description
elongation factor 1-alpha
See related
EnsemblRapid:ENSOMEG00005031776
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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Genomic context

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See LOC112136886 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
8
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG11 NC_050522.1 (13884793..13889680, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096076.1 (14250694..14255546)

Linkage Group LG11 - NC_050522.1Genomic Context describing neighboring genes Neighboring gene kelch-like family member 43 Neighboring gene ribosomal protein L11 Neighboring gene elongation factor 1-alpha Neighboring gene sialin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050522.1 Reference ASM292280v2 Primary Assembly

    Range
    13884793..13889680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024258869.2 → XP_024114637.1  elongation factor 1-alpha

    UniProtKB/TrEMBL
    A0A3B3CF47, A0A834CDQ0
    Related
    ENSOMEP00005058758.1, ENSOMET00005075615.1
    Conserved Domains (1) summary
    PTZ00141
    Location:1 → 461
    PTZ00141; elongation factor 1- alpha; Provisional
Nucleotide Protein Strain
Heading Accession and Version

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