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mgat1b alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b [ Salvelinus sp. IW2-2015 ]

Gene ID: 112068833, updated on 13-Aug-2024

Summary

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Gene symbol
mgat1b
Gene description
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
zebrafish all
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Genomic context

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See mgat1b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM291031v2 (GCF_002910315.2) Unplaced Scaffold NW_019942606.1 (479868..495029)

NW_019942606.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 11 Neighboring gene valyl-tRNA synthetase 2, mitochondrial Neighboring gene spliceosome RNA helicase DDX39B Neighboring gene RNA polymerase I subunit H Neighboring gene SH3 domain-binding protein 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019942606 Unplaced Scaffold Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NW_019942606.1 Reference ASM291031v2 Primary Assembly

    Range
    479868..495029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024136051.1 → XP_023991819.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like

    Conserved Domains (1) summary
    cd02514
    Location:181 → 512
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides

  2. XM_024136050.1 → XP_023991818.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like

    Conserved Domains (1) summary
    cd02514
    Location:181 → 512
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides

  3. XM_024136049.1 → XP_023991817.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like

    Conserved Domains (1) summary
    cd02514
    Location:181 → 512
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
Nucleotide Protein
Heading Accession and Version

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