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LOC112055133 irregular chiasm C-roughest protein [ Bicyclus anynana (squinting bush brown) ]

Gene ID: 112055133, updated on 13-Dec-2023

Summary

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Gene symbol
LOC112055133
Gene description
irregular chiasm C-roughest protein
See related
EnsemblRapid:ENSINYG00000010702
Gene type
protein coding
RefSeq status
MODEL
Organism
Bicyclus anynana
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Satyrinae; Satyrini; Mycalesina; Bicyclus
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Genomic context

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See LOC112055133 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2022_12 current ilBicAnyn1.1 (GCF_947172395.1) 18 NC_069100.1 (4552314..4679169, complement)
100 previous assembly Bicyclus_anynana_v1.2 (GCF_900239965.1) Unplaced Scaffold NW_019863465.1 (6823..67004, complement)

Chromosome 18 - NC_069100.1Genomic Context describing neighboring genes Neighboring gene irregular chiasm C-roughest protein Neighboring gene uncharacterized LOC128198987 Neighboring gene uncharacterized LOC128198981 Neighboring gene uncharacterized LOC112046930 Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene uncharacterized LOC112056376 Neighboring gene uncharacterized LOC112056377

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Wound healing, calcium signaling, and other novel pathways are associated with the formation of butterfly eyespots. Özsu N, et al. BMC Genomics, 2017 Oct 16. PMID 29037153, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947172395.1-RS_2022_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilBicAnyn1.1

Genomic

  1. NC_069100.1 Reference ilBicAnyn1.1

    Range
    4552314..4679169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052886729.1 → XP_052742689.1  irregular chiasm C-roughest protein

    Related
    ENSINYP00000013410.1, ENSINYT00000018632.1

  2. XM_052886728.1 → XP_052742688.1  irregular chiasm C-roughest protein

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases