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LOC112039780 polygalacturonate 4-alpha-galacturonosyltransferase [ Quercus suber ]

Gene ID: 112039780, updated on 18-Jul-2024

Summary

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Gene symbol
LOC112039780
Gene description
polygalacturonate 4-alpha-galacturonosyltransferase
Locus tag
CFP56_008587
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus suber
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Also known as
GAUT1
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Genomic context

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See LOC112039780 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current Cork oak 2.0 (GCF_002906115.3) Unplaced Scaffold NW_027069629.1 (850893..852937)
100 previous assembly CorkOak1.0 (GCF_002906115.1) Unplaced Scaffold NW_019815283.1 (413530..421781)

NW_027069629.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136069417 Neighboring gene agamous-like MADS-box protein MADS3 Neighboring gene histone deacetylase complex subunit SAP18 Neighboring gene uncharacterized LOC111998010

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polygalacturonate 4-alpha-galacturonosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002906115.3-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cork oak 2.0

Genomic

  1. NW_027069629.1 Reference Cork oak 2.0

    Range
    850893..852937
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065777937.1 → XP_065634009.1  polygalacturonate 4-alpha-galacturonosyltransferase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases