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LOC112022592 beta-1,2-xylosyltransferase [ Quercus suber ]

Gene ID: 112022592, updated on 18-Jul-2024

Summary

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Gene symbol
LOC112022592
Gene description
beta-1,2-xylosyltransferase
Locus tag
CFP56_029611
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus suber
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Also known as
XYLT
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Genomic context

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See LOC112022592 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current Cork oak 2.0 (GCF_002906115.3) Unplaced Scaffold NW_027069955.1 (368545..378760, complement)
100 previous assembly CorkOak1.0 (GCF_002906115.1) Unplaced Scaffold NW_019809106.1 (1060699..1068023)

NW_027069955.1Genomic Context describing neighboring genes Neighboring gene receptor-like protein kinase 7 Neighboring gene small ribosomal subunit protein eS8 Neighboring gene uncharacterized LOC136063269 Neighboring gene beta-1,2-xylosyltransferase Neighboring gene pirin-like protein Neighboring gene F-box protein At3g07870-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,2-xylosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002906115.3-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cork oak 2.0

Genomic

  1. NW_027069955.1 Reference Cork oak 2.0

    Range
    368545..378760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024055210.2 → XP_023910978.2  beta-1,2-xylosyltransferase

Nucleotide Protein
Heading Accession and Version

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