U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC111982121 delta-sarcoglycan [ Salvelinus sp. IW2-2015 ]

Gene ID: 111982121, updated on 13-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
LOC111982121
Gene description
delta-sarcoglycan
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC111982121 in Genome Data Viewer
Location:
chromosome: LG20
Exon count:
8
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG20 NC_036860.1 (39749594..39847313, complement)

Linkage Group LG20 - NC_036860.1Genomic Context describing neighboring genes Neighboring gene rho GTPase-activating protein 7 Neighboring gene arginine--tRNA ligase, cytoplasmic Neighboring gene uncharacterized LOC111982060 Neighboring gene histone deacetylase 4-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_036860.1 Chromosome LG20 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036860.1 Reference ASM291031v2 Primary Assembly

    Range
    39749594..39847313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024013693.1 → XP_023869461.1  delta-sarcoglycan

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases