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LOC111980606 C-terminal-binding protein 1 [ Salvelinus alpinus (Arctic char) ]

Gene ID: 111980606, updated on 11-Jan-2024

Summary

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Gene symbol
LOC111980606
Gene description
C-terminal-binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus alpinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC111980606 in Genome Data Viewer
Location:
chromosome: LG20
Exon count:
11
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG20 NC_036860.1 (20723838..20738664, complement)

Linkage Group LG20 - NC_036860.1Genomic Context describing neighboring genes Neighboring gene hepatitis A virus cellular receptor 1 homolog Neighboring gene hepatitis A virus cellular receptor 2 homolog Neighboring gene early growth response protein 1 Neighboring gene protein FAM53C Neighboring gene lymphocyte cytosolic protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036860.1 Chromosome LG20 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036860.1 Reference ASM291031v2 Primary Assembly

    Range
    20723838..20738664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024011426.1 → XP_023867194.1  C-terminal-binding protein 1 isoform X1

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_024011427.1 → XP_023867195.1  C-terminal-binding protein 1 isoform X1

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_024011428.1 → XP_023867196.1  C-terminal-binding protein 1 isoform X2

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_024011429.1 → XP_023867197.1  C-terminal-binding protein 1 isoform X2

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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