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LOC111980408 heparan sulfate glucosamine 3-O-sulfotransferase 2-like [ Salvelinus sp. IW2-2015 ]

Gene ID: 111980408, updated on 13-Aug-2024

Summary

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Gene symbol
LOC111980408
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC111980408 in Genome Data Viewer
Location:
chromosome: LG20
Exon count:
2
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG20 NC_036860.1 (4681909..4700345, complement)

Linkage Group LG20 - NC_036860.1Genomic Context describing neighboring genes Neighboring gene interleukin-21 receptor-like Neighboring gene ubiquitin carboxyl-terminal hydrolase 31 Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 4-like Neighboring gene lysine-specific demethylase 8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036860.1 Chromosome LG20 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036860.1 Reference ASM291031v2 Primary Assembly

    Range
    4681909..4700345 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024011135.2 → XP_023866903.1  heparan sulfate glucosamine 3-O-sulfotransferase 2-like

    Conserved Domains (1) summary
    pfam00685
    Location:131 → 368
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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