U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC111979242 dnaJ homolog subfamily B member 6 [ Salvelinus sp. IW2-2015 ]

Gene ID: 111979242, updated on 13-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
LOC111979242
Gene description
dnaJ homolog subfamily B member 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC111979242 in Genome Data Viewer
Location:
chromosome: LG19
Exon count:
10
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG19 NC_036859.1 (19851362..19869006, complement)

Linkage Group LG19 - NC_036859.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 10-B Neighboring gene potassium voltage-gated channel subfamily B member 2-like Neighboring gene transient receptor potential cation channel subfamily A member 1-like Neighboring gene U7 small nuclear RNA Neighboring gene tiggy-winkle hedgehog protein-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_036859.1 Chromosome LG19 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036859.1 Reference ASM291031v2 Primary Assembly

    Range
    19851362..19869006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024009642.1 → XP_023865410.1  dnaJ homolog subfamily B member 6 isoform X1

    Conserved Domains (1) summary
    cl28246
    Location:4 → 139
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_024009643.1 → XP_023865411.1  dnaJ homolog subfamily B member 6 isoform X2

    Conserved Domains (1) summary
    cl28246
    Location:4 → 139
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases