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dpy19l3 dpy-19 like C-mannosyltransferase 3 [ Salvelinus sp. IW2-2015 ]

Gene ID: 111969270, updated on 13-Aug-2024

Summary

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Gene symbol
dpy19l3
Gene description
dpy-19 like C-mannosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
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Genomic context

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See dpy19l3 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
23
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG10 NC_036850.1 (11000006..11030178)

Linkage Group LG10 - NC_036850.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111969268 Neighboring gene zinc finger protein 507-like Neighboring gene B-cadherin-like Neighboring gene putative neural-cadherin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036850.1 Chromosome LG10 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036850.1 Reference ASM291031v2 Primary Assembly

    Range
    11000006..11030178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023995293.1 → XP_023851061.1  probable C-mannosyltransferase DPY19L3 isoform X2

    Conserved Domains (1) summary
    pfam10034
    Location:58 → 714
    Dpy19; Q-cell neuroblast polarisation

  2. XM_023995294.1 → XP_023851062.1  probable C-mannosyltransferase DPY19L3 isoform X2

    Conserved Domains (1) summary
    pfam10034
    Location:58 → 714
    Dpy19; Q-cell neuroblast polarisation

  3. XM_023995296.1 → XP_023851064.1  probable C-mannosyltransferase DPY19L3 isoform X2

    Conserved Domains (1) summary
    pfam10034
    Location:58 → 714
    Dpy19; Q-cell neuroblast polarisation

  4. XM_023995295.1 → XP_023851063.1  probable C-mannosyltransferase DPY19L3 isoform X2

    Conserved Domains (1) summary
    pfam10034
    Location:58 → 714
    Dpy19; Q-cell neuroblast polarisation

  5. XM_023995297.1 → XP_023851065.1  probable C-mannosyltransferase DPY19L3 isoform X3

    Conserved Domains (1) summary
    pfam10034
    Location:23 → 679
    Dpy19; Q-cell neuroblast polarisation

  6. XM_023995298.1 → XP_023851066.1  probable C-mannosyltransferase DPY19L3 isoform X4

    Conserved Domains (1) summary
    pfam10034
    Location:76 → 684
    Dpy19; Q-cell neuroblast polarisation

  7. XM_023995299.1 → XP_023851067.1  probable C-mannosyltransferase DPY19L3 isoform X4

    Conserved Domains (1) summary
    pfam10034
    Location:76 → 684
    Dpy19; Q-cell neuroblast polarisation

  8. XM_023995292.1 → XP_023851060.1  probable C-mannosyltransferase DPY19L3 isoform X1

    Conserved Domains (1) summary
    pfam10034
    Location:76 → 731
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
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