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c1galt1c1 C1GALT1-specific chaperone 1 [ Salvelinus sp. IW2-2015 ]

Gene ID: 111967615, updated on 13-Aug-2024

Summary

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Gene symbol
c1galt1c1
Gene description
C1GALT1-specific chaperone 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
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Genomic context

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See c1galt1c1 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
3
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG8 NC_036848.1 (23344654..23347741)

Linkage Group LG8 - NC_036848.1Genomic Context describing neighboring genes Neighboring gene protein eva-1 homolog C Neighboring gene chloride intracellular channel 2 Neighboring gene MCTS1 re-initiation and release factor Neighboring gene cullin 4B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036848.1 Chromosome LG8 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036848.1 Reference ASM291031v2 Primary Assembly

    Range
    23344654..23347741
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023992783.1 → XP_023848551.1  C1GALT1-specific chaperone 1-like

  2. XM_023992782.1 → XP_023848550.1  C1GALT1-specific chaperone 1-like

  3. XM_023992784.1 → XP_023848552.1  C1GALT1-specific chaperone 1-like

  4. XM_023992785.1 → XP_023848553.1  C1GALT1-specific chaperone 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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