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mgat4c mgat4 family member C [ Salvelinus sp. IW2-2015 ]

Gene ID: 111962732, updated on 13-Aug-2024

Summary

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Gene symbol
mgat4c
Gene description
mgat4 family member C
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
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Genomic context

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See mgat4c in Genome Data Viewer
Location:
chromosome: LG4q.1:29
Exon count:
7
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG4q.1:29 NC_036842.1 (87306073..87480398)

Linkage Group LG4q.1:29 - NC_036842.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111962731 Neighboring gene eukaryotic translation initiation factor 4, gamma 2b Neighboring gene neurotensin/neuromedin N-like Neighboring gene Ras association domain family member 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036842.1 Chromosome LG4q.1:29 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036842.1 Reference ASM291031v2 Primary Assembly

    Range
    87306073..87480398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023986036.1 → XP_023841804.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    Conserved Domains (1) summary
    pfam04666
    Location:85 → 351
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  2. XM_023986037.1 → XP_023841805.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    Conserved Domains (1) summary
    pfam04666
    Location:85 → 351
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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