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LOC111954039 mitochondrial basic amino acids transporter [ Salvelinus sp. IW2-2015 ]

Gene ID: 111954039, updated on 13-Aug-2024

Summary

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Gene symbol
LOC111954039
Gene description
mitochondrial basic amino acids transporter
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC111954039 in Genome Data Viewer
Location:
chromosome: LG28
Exon count:
7
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG28 NC_036868.1 (24758182..24777456, complement)

Linkage Group LG28 - NC_036868.1Genomic Context describing neighboring genes Neighboring gene synaptosome associated protein 25 Neighboring gene ankyrin repeat and EF-hand domain containing 1a Neighboring gene thyroxine 5-deiodinase-like Neighboring gene serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036868.1 Chromosome LG28 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036868.1 Reference ASM291031v2 Primary Assembly

    Range
    24758182..24777456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023973537.1 → XP_023829305.1  mitochondrial basic amino acids transporter isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:86 → 177
    Mito_carr; Mitochondrial carrier protein

  2. XM_023973538.1 → XP_023829306.1  mitochondrial basic amino acids transporter isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:120 → 199
    Mito_carr; Mitochondrial carrier protein

RNA

  1. XR_002875945.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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