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LOC111953465 dnaJ homolog subfamily B member 6 [ Salvelinus sp. IW2-2015 ]

Gene ID: 111953465, updated on 13-Aug-2024

Summary

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Gene symbol
LOC111953465
Gene description
dnaJ homolog subfamily B member 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC111953465 in Genome Data Viewer
Location:
chromosome: LG27
Exon count:
11
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG27 NC_036867.1 (18604964..18654389)

Linkage Group LG27 - NC_036867.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-protein ligase E3C-like Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene receptor-type tyrosine-protein phosphatase N2-like Neighboring gene non-SMC condensin II complex, subunit G2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036867.1 Chromosome LG27 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036867.1 Reference ASM291031v2 Primary Assembly

    Range
    18604964..18654389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023972759.1 → XP_023828527.1  dnaJ homolog subfamily B member 6 isoform X2

    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_023972756.1 → XP_023828524.1  dnaJ homolog subfamily B member 6 isoform X1

    Conserved Domains (1) summary
    cl28246
    Location:4 → 129
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  3. XM_023972761.1 → XP_023828529.1  dnaJ homolog subfamily B member 6 isoform X3

    Conserved Domains (1) summary
    cl28246
    Location:4 → 129
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  4. XM_023972762.1 → XP_023828530.1  dnaJ homolog subfamily B member 6 isoform X4

    Conserved Domains (1) summary
    cl28246
    Location:4 → 129
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  5. XM_023972763.1 → XP_023828531.1  dnaJ homolog subfamily B member 6 isoform X5

    Conserved Domains (1) summary
    cl28246
    Location:4 → 129
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  6. XM_023972758.2 → XP_023828526.1  dnaJ homolog subfamily B member 6 isoform X1

    Conserved Domains (1) summary
    cl28246
    Location:4 → 129
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  7. XM_023972757.1 → XP_023828525.1  dnaJ homolog subfamily B member 6 isoform X1

    Conserved Domains (1) summary
    cl28246
    Location:4 → 129
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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