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st6gal1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [ Salvelinus sp. IW2-2015 ]

Gene ID: 111950888, updated on 12-Sep-2024

Summary

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Gene symbol
st6gal1
Gene description
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
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Genomic context

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See st6gal1 in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
9
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG23 NC_036863.1 (47313955..47444179, complement)

Linkage Group LG23 - NC_036863.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene transfer RNA valine (anticodon UAC) Neighboring gene uncharacterized LOC111950875 Neighboring gene aldehyde dehydrogenase 3 family, member A2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036863.1 Chromosome LG23 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactoside alpha-2,6-sialyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036863.1 Reference ASM291031v2 Primary Assembly

    Range
    47313955..47444179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023968806.1 → XP_023824574.1  beta-galactoside alpha-2,6-sialyltransferase 1

    Conserved Domains (1) summary
    pfam00777
    Location:264 → 469
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_023968807.1 → XP_023824575.1  beta-galactoside alpha-2,6-sialyltransferase 1

    Conserved Domains (1) summary
    pfam00777
    Location:264 → 469
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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Gene LinkOut

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