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LOC111950091 delta-sarcoglycan-like [ Salvelinus sp. IW2-2015 ]

Gene ID: 111950091, updated on 13-Aug-2024

Summary

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Gene symbol
LOC111950091
Gene description
delta-sarcoglycan-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC111950091 in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
8
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG23 NC_036863.1 (21024055..21124961, complement)

Linkage Group LG23 - NC_036863.1Genomic Context describing neighboring genes Neighboring gene arginine--tRNA ligase, cytoplasmic-like Neighboring gene rho GTPase-activating protein 7-like Neighboring gene uncharacterized LOC111951069 Neighboring gene gem (nuclear organelle) associated protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036863.1 Chromosome LG23 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036863.1 Reference ASM291031v2 Primary Assembly

    Range
    21024055..21124961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023967444.1 → XP_023823212.1  delta-sarcoglycan-like

    Conserved Domains (1) summary
    pfam04790
    Location:22 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases