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LMAN1 lectin, mannose binding 1 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111941082, updated on 3-Aug-2024

Summary

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Gene symbol
LMAN1
Gene description
lectin, mannose binding 1
See related
Ensembl:ENSCCEG00000017294
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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See LMAN1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
12
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) Z Unlocalized Scaffold NW_019776567.1 (17062..29431)

NW_019776567.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111941026 Neighboring gene complexin 4 Neighboring gene retina and anterior neural fold homeobox Neighboring gene uncharacterized LOC111941104

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776567 Chromosome Z Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ERGIC-53

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776567.1 Reference cyaCae2

    Range
    17062..29431
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023944083.1 → XP_023799851.1  protein ERGIC-53 isoform X1

    Conserved Domains (1) summary
    cd06902
    Location:22 → 218
    lectin_ERGIC-53_ERGL; ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

  2. XM_023944084.1 → XP_023799852.1  protein ERGIC-53 isoform X2

    UniProtKB/TrEMBL
    A0A8C0ZGP4
    Related
    ENSCCEP00000019001.1, ENSCCET00000028938.1
    Conserved Domains (1) summary
    cd06902
    Location:22 → 218
    lectin_ERGIC-53_ERGL; ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain
Nucleotide Protein
Heading Accession and Version

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