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LOC111916948 uncharacterized LOC111916948 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111916948, updated on 10-Oct-2024

Summary

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Gene symbol
LOC111916948
Gene description
uncharacterized LOC111916948
Locus tag
LSAT_V11C800449860
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111916948 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 8 NC_056630.2 (288125322..288127947)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 8 NC_056630.1 (263167621..263170245)

Chromosome 8 - NC_056630.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111916968 Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene uncharacterized LOC111916945 Neighboring gene 60S ribosomal protein L12-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC111916948
Names
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056630.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    288125322..288127947
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023912593.3 → XP_023768361.1  uncharacterized protein LOC111916948

    UniProtKB/TrEMBL
    A0A9R1UM32
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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