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LOC111911777 callose synthase 5 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111911777, updated on 23-Nov-2023

Summary

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Gene symbol
LOC111911777
Gene description
callose synthase 5
Locus tag
LSAT_V11C800436640
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111911777 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
41
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 8 NC_056630.2 (192176337..192194930, complement)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 8 NC_056630.1 (179805889..179823263)

Chromosome 8 - NC_056630.2Genomic Context describing neighboring genes Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene nuclear intron maturase 1, mitochondrial Neighboring gene uncharacterized LOC111911776 Neighboring gene 50S ribosomal protein L2, chloroplastic-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056630.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    192176337..192194930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052766115.1 → XP_052622075.1  callose synthase 5 isoform X2

  2. XM_023907519.3 → XP_023763287.2  callose synthase 5 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases