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LOC111911063 granule-bound starch synthase 1, chloroplastic/amyloplastic [ Lactuca sativa (garden lettuce) ]

Gene ID: 111911063, updated on 18-Sep-2024

Summary

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Gene symbol
LOC111911063
Gene description
granule-bound starch synthase 1, chloroplastic/amyloplastic
Locus tag
LSAT_V11C200076980
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111911063 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 2 NC_056624.2 (163458292..163461650, complement)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 2 NC_056624.1 (148124193..148127516, complement)

Chromosome 2 - NC_056624.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128132415 Neighboring gene wall-associated receptor kinase-like 1 Neighboring gene rab escort protein 1 Neighboring gene uncharacterized LOC111911065

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granule-bound starch synthase 1, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056624.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    163458292..163461650 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023906842.3 → XP_023762610.1  granule-bound starch synthase 1, chloroplastic/amyloplastic isoform X1

  2. XM_052768482.1 → XP_052624442.1  granule-bound starch synthase 1, chloroplastic/amyloplastic isoform X1

  3. XM_023906843.3 → XP_023762611.1  granule-bound starch synthase 1, chloroplastic/amyloplastic isoform X2

Nucleotide Protein
Heading Accession and Version

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