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LOC111909926 hydroxyproline O-galactosyltransferase HPGT3 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111909926, updated on 10-Oct-2024

Summary

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Gene symbol
LOC111909926
Gene description
hydroxyproline O-galactosyltransferase HPGT3
Locus tag
LSAT_V11C100018040
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111909926 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 1 NC_056623.2 (52786682..52790072)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 1 NC_056623.1 (50820207..50823589)

Chromosome 1 - NC_056623.2Genomic Context describing neighboring genes Neighboring gene B3 domain-containing protein REM10 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like Neighboring gene heparanase-like protein 3 Neighboring gene ubiquitin-like domain-containing protein CIP73 Neighboring gene uncharacterized LOC111909928

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase HPGT3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056623.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    52786682..52790072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023905704.3 → XP_023761472.1  hydroxyproline O-galactosyltransferase HPGT3 isoform X1

    UniProtKB/TrEMBL
    A0A9R1WK23

  2. XM_023905705.3 → XP_023761473.1  hydroxyproline O-galactosyltransferase HPGT3 isoform X1

    UniProtKB/TrEMBL
    A0A9R1WK23

  3. XM_023905706.3 → XP_023761474.1  hydroxyproline O-galactosyltransferase HPGT3 isoform X2

Nucleotide Protein
Heading Accession and Version

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