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LOC111908530 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111908530, updated on 23-Nov-2023

Summary

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Gene symbol
LOC111908530
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
Locus tag
LSAT_V11C600327270
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111908530 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 6 NC_056628.2 (136680435..136700891, complement)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 6 NC_056628.1 (126710687..126731010, complement)

Chromosome 6 - NC_056628.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111908529 Neighboring gene uncharacterized LOC111909133 Neighboring gene probable serine/threonine-protein kinase PBL25 Neighboring gene very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056628.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    136680435..136700891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023904348.3 → XP_023760116.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A2J6LLV7, A0A9R1V609
    Conserved Domains (1) summary
    PLN03064
    Location:2 → 898
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Nucleotide Protein
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