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LOC111902006 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [ Lactuca sativa (garden lettuce) ]

Gene ID: 111902006, updated on 10-Oct-2024

Summary

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Gene symbol
LOC111902006
Gene description
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
Locus tag
LSAT_V11C800420050
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111902006 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 8 NC_056630.2 (118453559..118459673)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 8 NC_056630.1 (109472495..109478603, complement)

Chromosome 8 - NC_056630.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128125827 Neighboring gene uncharacterized LOC111902007 Neighboring gene cytochrome c-type biogenesis protein CcmE homolog, mitochondrial Neighboring gene uncharacterized LOC111902004

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056630.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    118453559..118459673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023897875.3 → XP_023753643.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

    UniProtKB/TrEMBL
    A0A9R1WY38
Nucleotide Protein
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