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LOC111887211 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111887211, updated on 10-Oct-2024

Summary

Gene symbol
LOC111887211
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
Locus tag
LSAT_V11C400159840
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

See LOC111887211 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 4 NC_056626.2 (11352194..11356148, complement)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 4 NC_056626.1 (8904546..8908494, complement)

Chromosome 4 - NC_056626.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128133361 Neighboring gene AP-1 complex subunit gamma-2 Neighboring gene uncharacterized LOC111887199 Neighboring gene alpha-amylase-like Neighboring gene serine/arginine-rich splicing factor RSZ22

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056626.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    11352194..11356148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023883371.3XP_023739139.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

    UniProtKB/TrEMBL
    A0A9R1VL72