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LOC111886142 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111886142, updated on 23-Nov-2023

Summary

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Gene symbol
LOC111886142
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5
Locus tag
LSAT_V11C900489230
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111886142 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 9 NC_056631.2 (144713080..144721783, complement)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 9 NC_056631.1 (124123755..124132303, complement)

Chromosome 9 - NC_056631.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111886146 Neighboring gene purple acid phosphatase 2 Neighboring gene probable methyltransferase PMT26 Neighboring gene DNA polymerase lambda

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056631.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    144713080..144721783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023882368.2 → XP_023738136.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5

    UniProtKB/TrEMBL
    A0A2J6K5S9, A0A9R1WSK7
Nucleotide Protein
Heading Accession and Version

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