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LOC111886049 beta-1,6-galactosyltransferase GALT29A [ Lactuca sativa (garden lettuce) ]

Gene ID: 111886049, updated on 10-Oct-2024

Summary

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Gene symbol
LOC111886049
Gene description
beta-1,6-galactosyltransferase GALT29A
Locus tag
LSAT_V11C100024820
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111886049 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 1 NC_056623.2 (75870984..75872744, complement)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 1 NC_056623.1 (71126284..71128119, complement)

Chromosome 1 - NC_056623.2Genomic Context describing neighboring genes Neighboring gene CEN-like protein 2 Neighboring gene uncharacterized LOC111886020 Neighboring gene patellin-3 Neighboring gene protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 Neighboring gene subtilisin-like serine-protease S

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,6-galactosyltransferase GALT29A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056623.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    75870984..75872744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023882290.3 → XP_023738058.1  beta-1,6-galactosyltransferase GALT29A

    UniProtKB/TrEMBL
    A0A9R1XY18
Nucleotide Protein
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