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LOC111885532 galacturonosyltransferase 8 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111885532, updated on 10-Oct-2024

Summary

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Gene symbol
LOC111885532
Gene description
galacturonosyltransferase 8
Locus tag
LSAT_V11C900460730
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111885532 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 9 NC_056631.2 (15381163..15383490)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 9 NC_056631.1 (15545214..15547535)

Chromosome 9 - NC_056631.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111885595 Neighboring gene wound-induced basic protein-like Neighboring gene uncharacterized LOC111885599 Neighboring gene ninja-family protein AFP1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galacturonosyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056631.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    15381163..15383490
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023881785.3 → XP_023737553.1  galacturonosyltransferase 8

    UniProtKB/TrEMBL
    A0A9R1WS88
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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