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LOC111882659 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [ Lactuca sativa (garden lettuce) ]

Gene ID: 111882659, updated on 10-Oct-2024

Summary

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Gene symbol
LOC111882659
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Locus tag
LSAT_V11C200055870
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111882659 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 2 NC_056624.2 (33277222..33280207, complement)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 2 NC_056624.1 (29582155..29585136, complement)

Chromosome 2 - NC_056624.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128132289 Neighboring gene putative DNA-binding protein At1g48610 Neighboring gene uncharacterized LOC111882658 Neighboring gene cleavage stimulating factor 64

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056624.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    33277222..33280207 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023879032.3 → XP_023734800.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    UniProtKB/TrEMBL
    A0A9R1WGU2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases