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LOC111882279 beta-arabinofuranosyltransferase RAY1 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111882279, updated on 23-Nov-2023

Summary

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Gene symbol
LOC111882279
Gene description
beta-arabinofuranosyltransferase RAY1
Locus tag
LSAT_V11C800449640
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111882279 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 8 NC_056630.2 (285038494..285043164)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 8 NC_056630.1 (260794295..260798945)

Chromosome 8 - NC_056630.2Genomic Context describing neighboring genes Neighboring gene ABC transporter B family member 26, chloroplastic Neighboring gene uncharacterized LOC111882278 Neighboring gene inorganic phosphate transporter 2-1, chloroplastic Neighboring gene uncharacterized LOC111882298

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-arabinofuranosyltransferase RAY1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056630.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    285038494..285043164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023878629.3 → XP_023734397.1  beta-arabinofuranosyltransferase RAY1

    UniProtKB/TrEMBL
    A0A9R1UWU2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases