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LOC111881866 probable glycosyltransferase At3g42180 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111881866, updated on 10-Oct-2024

Summary

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Gene symbol
LOC111881866
Gene description
probable glycosyltransferase At3g42180
Locus tag
LSAT_V11C500262700
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111881866 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 5 NC_056627.2 (230095830..230097844)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 5 NC_056627.1 (205845244..205847206)

Chromosome 5 - NC_056627.2Genomic Context describing neighboring genes Neighboring gene heptahelical transmembrane protein 1 Neighboring gene probable glycosyltransferase At5g20260 Neighboring gene probable glycosyltransferase At3g42180 Neighboring gene uncharacterized LOC111881828

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable glycosyltransferase At3g42180

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056627.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    230095830..230097844
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023878250.3 → XP_023734018.3  probable glycosyltransferase At3g42180

    UniProtKB/TrEMBL
    A0A9R1XFN6
Nucleotide Protein
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