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LOC111876658 probable galacturonosyltransferase 9 [ Lactuca sativa (garden lettuce) ]

Gene ID: 111876658, updated on 10-Oct-2024

Summary

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Gene symbol
LOC111876658
Gene description
probable galacturonosyltransferase 9
Locus tag
LSAT_V11C200082040
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111876658 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 2 NC_056624.2 (181180270..181183049, complement)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 2 NC_056624.1 (165110647..165113422, complement)

Chromosome 2 - NC_056624.2Genomic Context describing neighboring genes Neighboring gene protein GLUTAMINE DUMPER 2 Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating 2 Neighboring gene WPP domain-interacting tail-anchored protein 1 Neighboring gene WPP domain-interacting tail-anchored protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056624.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    181180270..181183049 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023873212.3 → XP_023728980.1  probable galacturonosyltransferase 9

    UniProtKB/TrEMBL
    A0A9R1WEK3
Nucleotide Protein
Heading Accession and Version

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